| Class | Order | Family | Genus | Species | Accounts | Images |
|---|
| Reptilia | Squamata | Agamidae | Bronchocela | Bronchocela cristatella (Kuhl, 1820) | Read | View |
| Reptilia | Squamata | Agamidae | Draco | Draco bimaculatus Günther, 1864 | Read | View |
| Reptilia | Squamata | Agamidae | Draco | Draco cyanopterus Peters, 1867 | Read | View |
| Reptilia | Squamata | Agamidae | Draco | Draco spilopterus Wiegmann, 1834 | Read | View |
| Reptilia | Squamata | Agamidae | Gonocephalus | Gonocephalus sophiae (Gray, 1845) | Read | View |
| Reptilia | Squamata | Agamidae | Hydrosaurus | Hydrosaurus pustulatus (Eschscholtz, 1829) | Read | View |
| Reptilia | Squamata | Dibamidae | Dibamus | Dibamus novaeguineae Duméril & Bibron, 1839 | Read | View |
| Reptilia | Squamata | Gekkonidae | Cosymbotus | Cosymbotus platyurus (Schneider, 1792) | Read | View |
| Reptilia | Squamata | Gekkonidae | Cyrtodactylus | Cyrtodactylus annulatus (Taylor, 1915) | Read | View |
| Reptilia | Squamata | Gekkonidae | Cyrtodactylus | Cyrtodactylus philippinicus (Steindachner, 1867) | Read | View |
| Reptilia | Squamata | Gekkonidae | Gehyra | Gehyra mutilata (Wiegmann, 1834) | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko athymus Brown & Alcala, 1962 | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko gecko (Linnaeus, 1768) | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko gigante Brown & Alcala, 1978 | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko mindorensis Taylor, 1919 | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko monarchus (Schlegel in Duméril and Bibron, 1936) | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko palawanensis Taylor, 1925 | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko porosus Taylor, 1922 | Read | View |
| Reptilia | Squamata | Gekkonidae | Gekko | Gekko romblon Brown & Alcala, 1978 | Read | View |
| Reptilia | Squamata | Gekkonidae | Hemidactylus | Hemidactylus stejnegeri Ota & Hikida, 1989 | Read | View |
| Reptilia | Squamata | Gekkonidae | Lepidodactylus | Lepidodactylus herrei herrei Taylor, 1923 | Read | View |
| Reptilia | Squamata | Gekkonidae | Lepidodactylus | Lepidodactylus lugubris (Duméril & Bibron, 1836) | Read | View |
| Reptilia | Squamata | Gekkonidae | Lepidodactylus | Lepidodactylus planicaudus Stejneger, 1905 | Read | View |
| Reptilia | Squamata | Gekkonidae | Luperosaurus | Luperosaurus cumingii Gray, 1845 | Read | View |
| Reptilia | Squamata | Gekkonidae | Luperosaurus | Luperosaurus macgregori Stejneger, 1907 | Read | View |
| Reptilia | Squamata | Gekkonidae | Pseudogekko | Pseudogekko compressicorpus (Taylor, 1915) | Read | View |
| Reptilia | Squamata | Gekkonidae | Pseudogekko | Pseudogekko smaragdinus (Taylor, 1922) | Read | View |
| Reptilia | Squamata | Gekkonidae | Ptychozoon | Ptychozoon intermedium Taylor, 1915 | Read | View |
| Reptilia | Squamata | Scincidae | Brachymeles | Brachymeles bonitae Duméril & Bibron, 1839 | Read | View |
| Reptilia | Squamata | Scincidae | Brachymeles | Brachymeles boulengeri boholensis Brown & Rabor, 1967 | Read | View |
| Reptilia | Squamata | Scincidae | Brachymeles | Brachymeles boulengeri boulengeri Taylor, 1922 | Read | View |
| Reptilia | Squamata | Scincidae | Brachymeles | Brachymeles boulengeri taylori Brown, 1956 | Read | View |
| Reptilia | Squamata | Scincidae | Brachymeles | Brachymeles tridactylus Brown, 1956 | Read | View |
| Reptilia | Squamata | Scincidae | Dasia | Dasia grisea (Gray, 1845) | Read | View |
| Reptilia | Squamata | Scincidae | Eutropis | Eutropis bontocensis (Taylor, 1923) | Read | View |
| Reptilia | Squamata | Scincidae | Eutropis | Eutropis cumingi (Brown & Alcala, 1980) | Read | View |
| Reptilia | Squamata | Scincidae | Eutropis | Eutropis multicarinata borealis (Brown & Alcala, 1980) | Read | View |
| Reptilia | Squamata | Scincidae | Eutropis | Eutropis multicarinata multicarinata (Gray, 1845) | Read | View |
| Reptilia | Squamata | Scincidae | Eutropis | Eutropis multifasciata (Kuhl, 1820) | Read | View |
| Reptilia | Squamata | Scincidae | Lamprolepis | Lamprolepis smaragdina philippinica (Mertens, 1929) | Read | View |
| Reptilia | Squamata | Scincidae | Lipinia | Lipinia pulchella taylori (Brown & Alcala, 1956) | Read | View |
| Reptilia | Squamata | Scincidae | Lipinia | Lipinia quadrivittata (Peters, 1867) | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus abdictus abdictus Brown & Alcala, 1980 | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus abdictus aquilonius Brown & Alcala, 1980 | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus beyeri Taylor, 1922 | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus cumingi (Gray, 1845) | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus jagori jagori (Peters, 1864) | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus knollmanae R.M. Brown, Ferner, and Ruedas,1995 | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus leucospilos (Peters, 1872) | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus steerei Stejneger, 1908 | Read | View |
| Reptilia | Squamata | Scincidae | Sphenomorphus | Sphenomorphus tagapayo R.M. Brown, J. A. McGuire, J. W. Ferner, and A. C. | Read | View |
| Reptilia | Squamata | Scincidae | Tropidophorus | Tropidophorus grayi Günther, 1861 | Read | View |
| Reptilia | Squamata | Varanidae | Varanus | Varanus olivaceus Hallowell, 1859 | Read | View |
| Reptilia | Squamata | Varanidae | Varanus | Varanus salvator None | Read | View |
| Reptilia | Squamata | Varanidae | Varanus | Varanus salvator marmoratus (Wiegmann, 1834) | Read | View |
| Reptilia | Squamata | Varanidae | Varanus | Varanus salvator nuchalis (Günther, 1872) | Read | View |